The cross fusion members set out to defeat the Darkloids and stop the excavator. Meanwhile, Lan has to retrieve his synchro chip when Dark Miyabi steals it.
- Actually a Doombot: Mega Man finds the real Shadow Man among his copies and then shoots with a vulcan chip only for a sword to appear from underground as Shadow Man launches an attack from behind and Mega Man not being able to react fast enough.
- Big Damn Heroes: Needle Man saves Mega Man from a sneak attack by Shadow Man.
- The Bus Came Back: First appearance of Dr. Regal in the anime proper after the Axess finale.
- Grey-and-Gray Morality: Miyabi tells Lan he is neither an ally or an enemy and only carries out contracts for whoever hires him.
- Hired Guns: Miyabi reveals that Tesla hired him to delete Mega Man before disappearing.
- Marked By The Supernatural: Miyabi is the last person shown to have Duo's Crest.